Transcript: lnc-ASB7-4:2

Basic information

LNCipedia transcript ID: lnc-ASB7-4:2 
LNCipedia gene ID: lnc-ASB7-4
Location (hg38): chr15:100348624-100352106
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2052 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023558; NONHSAT051093
Alternative gene names: XLOC_011384; linc-ASB7-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0516 non-coding 
CPAT coding probability 5.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB7-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASB7-2:2
3.1 lnc-ASB7-4:2
4.0 lnc-ASB7-4:2
4.1 lnc-ASB7-4:2
5.0 lnc-ASB7-4:2
5.1 lnc-OR4F15-20:2
5.2 lnc-ASB7-4:2