Transcript: lnc-ARRDC3-6:1

Basic information

LNCipedia transcript ID: lnc-ARRDC3-6:1 
LNCipedia gene ID: lnc-ARRDC3-6
Location (hg38): chr5:91338489-91341617
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 778 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2969_chr5:90634305-90635516_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.3821 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRDC3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRDC3-6:1
4.0 lnc-ARRDC3-6:1
4.1 lnc-ARRDC3-6:1
5.0 lnc-ARRDC3-6:1
5.1 lnc-ANKRD34B-171:1
5.2 lnc-ARRDC3-6:1