Transcript: lnc-ARRB1-1:1

Basic information

LNCipedia transcript ID: lnc-ARRB1-1:1 
LNCipedia gene ID: lnc-ARRB1-1
Ensembl Gene ID: ENSG00000255136
Ensembl Transcript ID: ENST00000530792
Location (hg38): chr11:75208054-75241173
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000530792.1; CTD-2562J17.4-001; OTTHUMT00000384086.1; NONHSAT023084
Alternative gene names: ENSG00000255136.1; CTD-2562J17.4; OTTHUMG00000165439.1; ENSG00000255136.2; AP001972.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.8424 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRB1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRB1-1:1
4.0 lnc-ARRB1-1:1
4.1 lnc-ARRB1-1:1
5.0 lnc-ARRB1-1:1
5.1 lnc-WNT11-35:9
5.2 lnc-ARRB1-1:1