Transcript: lnc-ARMCX3-1:2

Basic information

LNCipedia transcript ID: lnc-ARMCX3-1:2 
LNCipedia gene ID: lnc-ARMCX3-1
Ensembl Gene ID: ENSG00000261101
Ensembl Transcript ID: ENST00000564612
Location (hg38): chrX:101627868-101628523
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 656 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564612.2
Alternative gene names: ENSG00000261101.2; RP4-545K15.5; AC234775.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.8796 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARMCX3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ARMCX3-1:2
4.1 lnc-ARMCX3-1:2
5.0 lnc-ARMCX3-1:2
5.1 lnc-TEX13C-258:2
5.2 lnc-ARMCX3-1:2