Transcript: lnc-ARL6IP5-2:1

Basic information

LNCipedia transcript ID: lnc-ARL6IP5-2:1 
LNCipedia gene ID: lnc-ARL6IP5-2
Location (hg38): chr3:68953433-68969676
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006085; NONHSAT090332
Alternative gene names: XLOC_002694; linc-ARL6IP5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.1975 non-coding 
CPAT coding probability 44.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARL6IP5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARL6IP5-1:1
3.1 lnc-ARL6IP5-2:1
4.0 lnc-ARL6IP5-2:1
4.1 lnc-ARL6IP5-2:1
5.0 lnc-ARL6IP5-2:1
5.1 lnc-FAM19A1-2:2
5.2 lnc-ARL6IP5-2:1