Transcript: lnc-ARL4C-12:1

Basic information

LNCipedia transcript ID: lnc-ARL4C-12:1 
LNCipedia gene ID: lnc-ARL4C-12
Location (hg38): chr2:234130579-234290627
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4773 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051936.1|MICT00000210041.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.5646 non-coding 
CPAT coding probability 18.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL4C-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARL4C-12:1
5.0 lnc-ARL4C-12:1
5.1 lnc-GBX2-17:1
5.2 lnc-ARL4C-12:1