Transcript: lnc-ARL4A-54:2

Basic information

LNCipedia transcript ID: lnc-ARL4A-54:2 
LNCipedia gene ID: lnc-ARL4A-54
Ensembl Gene ID: ENSG00000229618
Ensembl Transcript ID: ENST00000638964
Location (hg38): chr7:12802249-13704540
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1350 bp
Exons: 6
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000638964.1
Alternative gene names: ENSG00000229618.2; AC011287.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.3654 non-coding 
CPAT coding probability 4.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL4A-54:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-AHR-54:2
5.1 lnc-AHR-54:2
5.2 lnc-ARL4A-54:2