Transcript: lnc-ARL14EP-1:1

Basic information

LNCipedia transcript ID: lnc-ARL14EP-1:1 
LNCipedia gene ID: lnc-ARL14EP-1
Ensembl Gene ID: ENSG00000255480
Ensembl Transcript ID: ENST00000529078
Location (hg38): chr11:30425552-30429268
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 365 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529078.1; RP4-710M3.2-001; OTTHUMT00000388133.1; NONHSAT018594
Alternative gene names: ENSG00000255480.1; RP4-710M3.2; OTTHUMG00000166155.1; AL353699.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -224.8821 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL14EP-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf46-1:1
4.0 lnc-C11orf46-1:1
4.1 lnc-C11orf46-1:1
5.0 lnc-C11orf46-1:1
5.1 lnc-QSER1-23:1
5.2 lnc-ARL14EP-1:1