Transcript: lnc-ARHGAP26-9:3

Basic information

LNCipedia transcript ID: lnc-ARHGAP26-9:3 
LNCipedia gene ID: lnc-ARHGAP26-9
Location (hg38): chr5:143404617-143407389
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2180 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000077862.1|MICT00000290661.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -91.2777 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP26-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP26-9:3
5.0 lnc-ARHGAP26-9:3
5.1 lnc-PCDHGA7-31:3
5.2 lnc-ARHGAP26-9:3