Transcript: lnc-ARHGAP20-11:3

Basic information

LNCipedia transcript ID: lnc-ARHGAP20-11:3 
LNCipedia gene ID: lnc-ARHGAP20-11
Location (hg38): chr11:110069080-110069535
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 456 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006914.1|FTMT24200006190.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.0195 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP20-11:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RDX-11:2
5.0 lnc-RDX-11:2
5.1 lnc-ARHGAP20-13:2
5.2 lnc-ARHGAP20-11:3