Transcript: lnc-ARF6-2:1

Basic information

LNCipedia transcript ID: lnc-ARF6-2:1 
LNCipedia gene ID: lnc-ARF6-2
Location (hg38): chr14:49991376-50007243
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2836 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000508586
Alternative gene names: ENSG00000248297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.8611 non-coding 
CPAT coding probability 5.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF6-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARF6-2:1
3.1 lnc-ARF6-2:1
4.0 lnc-ARF6-2:1
4.1 lnc-ARF6-2:1
5.0 lnc-ARF6-2:1
5.1 lnc-AP5M1-107:1
5.2 lnc-ARF6-2:1