Transcript: lnc-ARF6-13:1

Basic information

LNCipedia transcript ID: lnc-ARF6-13:1 
LNCipedia gene ID: lnc-ARF6-13
Location (hg38): chr14:49868462-49869100
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 639 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018862.1|FTMT25600002072.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -182.1693 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF6-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARF6-13:1
5.0 lnc-ARF6-13:1
5.1 lnc-AP5M1-114:1
5.2 lnc-ARF6-13:1