Transcript: lnc-ARF5-5:1

Basic information

LNCipedia transcript ID: lnc-ARF5-5:1 
LNCipedia gene ID: lnc-ARF5-5
Location (hg38): chr7:126230233-126284162
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 299 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013582; NONHSAT123115
Alternative gene names: XLOC_006235; linc-ARF5-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF5-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARF5-4:1
3.1 lnc-ARF5-5:1
4.0 lnc-ARF5-5:1
4.1 lnc-ARF5-5:1
5.0 lnc-ARF5-5:1
5.1 lnc-SPAM1-19:1
5.2 lnc-ARF5-5:1