Transcript: lnc-ARF5-18:1

Basic information

LNCipedia transcript ID: lnc-ARF5-18:1 
LNCipedia gene ID: lnc-ARF5-18
Location (hg38): chr7:127392827-127394456
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1630 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000093868.1|ENCT00000404941.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.1058 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF5-18:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARF5-18:1
5.0 lnc-ARF5-18:1
5.1 lnc-TSPAN33-47:1
5.2 lnc-ARF5-18:1