Transcript: lnc-ARF5-12:1

Basic information

LNCipedia transcript ID: lnc-ARF5-12:1 
LNCipedia gene ID: lnc-ARF5-12
Location (hg38): chr7:127295620-127296203
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 584 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT123134
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 121.231 coding 
CPAT coding probability 60.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARF5-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARF5-12:1
4.0 lnc-ARF5-12:1
4.1 lnc-ARF5-12:1
5.0 lnc-ARF5-12:1
5.1 lnc-TSPAN33-50:1
5.2 lnc-ARF5-12:1