Transcript: lnc-ARF1-3:3

Basic information

LNCipedia transcript ID: lnc-ARF1-3:3 
LNCipedia gene ID: lnc-ARF1-3
Location (hg38): chr1:228109471-228115056
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5077 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000038117.1|MICT00000032131.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.1623 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARF1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARF1-3:3
5.0 lnc-ARF1-3:3
5.1 lnc-ZNF678-14:2
5.2 lnc-ARF1-3:3