Transcript: lnc-APELA-2:1

Basic information

LNCipedia transcript ID: lnc-APELA-2:1 
LNCipedia gene ID: lnc-APELA-2
Location (hg38): chr4:164754089-164755987
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 589 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_24399_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -183.5489 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APELA-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf39-2:4
4.0 LINC01207:3
4.1 LINC01207:3
5.0 LINC01207:3
5.1 lnc-CLCN3-38:3
5.2 lnc-APELA-2:1