Transcript: lnc-APELA-1:1

Basic information

LNCipedia transcript ID: lnc-APELA-1:1 
LNCipedia gene ID: lnc-APELA-1
Location (hg38): chr4:164895216-164897517
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2302 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT099084; FPKM1_group_24409_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.1519 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APELA-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf39-1:10
4.0 lnc-C4orf39-1:10
4.1 lnc-C4orf39-1:10
5.0 lnc-C4orf39-1:10
5.1 lnc-CLCN3-37:12
5.2 lnc-APELA-1:1