Transcript: lnc-ANO2-3:3

Basic information

LNCipedia transcript ID: lnc-ANO2-3:3 
LNCipedia gene ID: lnc-ANO2-3
Location (hg38): chr12:5531910-5533884
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 259 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020691; NONHSAT026015
Alternative gene names: XLOC_009993; linc-AKAP3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -203.2411 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANO2-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VWF-3:1
3.1 lnc-VWF-3:1
4.0 lnc-ANO2-3:3
4.1 lnc-ANO2-3:3
5.0 lnc-ANO2-3:3
5.1 lnc-CHD4-57:2
5.2 lnc-ANO2-3:3