Transcript: lnc-ANLN-1:1

Basic information

LNCipedia transcript ID: lnc-ANLN-1:1 
LNCipedia gene ID: lnc-ANLN-1
Ensembl Gene ID: ENSG00000237400
Ensembl Transcript ID: ENST00000435254
Location (hg38): chr7:36463023-36504513
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 4
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00012994; ENST00000435254.1; AC006960.7-001; OTTHUMT00000337739.1; NONHSAT120128
Alternative gene names: XLOC_006046; linc-GPR141-6; ENSG00000237400.1; AC006960.7; OTTHUMG00000154940.1; AC006960.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3259 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANLN-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANLN-1:1
3.1 lnc-ANLN-1:1
4.0 lnc-ANLN-1:1
4.1 lnc-ANLN-1:1
5.0 lnc-ANLN-1:1
5.1 lnc-CCDC129-53:1
5.2 lnc-ANLN-1:1