Transcript: lnc-ANKS4B-5:7

Basic information

LNCipedia transcript ID: lnc-ANKS4B-5:7 
LNCipedia gene ID: lnc-ANKS4B-5
Location (hg38): chr16:21300884-21320831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 19057 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000189149.7|ENCT00000157013.1
Alternative gene names: FLJ41766


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 77.2867 coding 
CPAT coding probability 20.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKS4B-5:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CRYM-AS1:6
5.0 CRYM-AS1:6
5.1 lnc-TMC5-34:7
5.2 lnc-ANKS4B-5:7