Transcript: lnc-ANKS4B-5:2

Basic information

LNCipedia transcript ID: lnc-ANKS4B-5:2 
LNCipedia gene ID: lnc-ANKS4B-5
RefSeq ID: NR_026675
Location (hg38): chr16:21300849-21318591
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2304 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT140971; NR_026675; NR_026675.1
Alternative gene names: FLJ41766; CRYM-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.9868 non-coding 
CPAT coding probability 26.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKS4B-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKS4B-1:4
4.0 CRYM-AS1:2
4.1 CRYM-AS1:2
5.0 CRYM-AS1:2
5.1 lnc-TMC5-34:2
5.2 lnc-ANKS4B-5:2