Transcript: lnc-ANKRD65-1:1

Basic information

LNCipedia transcript ID: lnc-ANKRD65-1:1 
LNCipedia gene ID: lnc-ANKRD65-1
Location (hg38): chr1:1425452-1427799
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 443 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000439191.1; RP4-758J18.8-001; OTTHUMT00000008136.1; NONHSAT000320
Alternative gene names: ENSG00000230270.1; RP4-758J18.8; OTTHUMG00000002913.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.9238 non-coding 
CPAT coding probability 4.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD65-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD65-1:1
4.0 lnc-ANKRD65-1:1
4.1 lnc-ANKRD65-1:1
5.0 lnc-ANKRD65-1:1
5.1 lnc-CLSTN1-134:1
5.2 lnc-ANKRD65-1:1