Transcript: lnc-ANKRD50-4:3

Basic information

LNCipedia transcript ID: lnc-ANKRD50-4:3 
LNCipedia gene ID: lnc-ANKRD50-4
Location (hg38): chr4:124025344-124028291
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008569; NONHSAT098209
Alternative gene names: XLOC_004061; linc-NUDT6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.2348 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD50-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD50-4:3
3.1 lnc-ANKRD50-4:3
4.0 lnc-ANKRD50-4:3
4.1 lnc-ANKRD50-4:3
5.0 lnc-ANKRD50-4:3
5.1 lnc-TRPC3-13:3
5.2 lnc-ANKRD50-4:3