Transcript: lnc-ANKRD36B-4:1

Basic information

LNCipedia transcript ID: lnc-ANKRD36B-4:1 
LNCipedia gene ID: lnc-ANKRD36B-4
Location (hg38): chr2:97404351-97406773
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00003334; ENST00000422600; ENST00000422600.1; AC159540.3-001; OTTHUMT00000328926.1; NONHSAT072629
Alternative gene names: XLOC_002217; linc-FAHD2B-3; ENSG00000237837; AC159540.3; ENSG00000237837.1; OTTHUMG00000152992.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.7729 non-coding 
CPAT coding probability 8.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD36B-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACTR1B-4:1
3.1 lnc-ACTR1B-4:1
4.0 lnc-ACTR1B-4:1
4.1 lnc-ACTR1B-4:1
5.0 lnc-ACTR1B-4:1
5.1 lnc-AFF3-49:1
5.2 lnc-ANKRD36B-4:1