Transcript: lnc-ANKRD30B-2:2

Basic information

LNCipedia transcript ID: lnc-ANKRD30B-2:2 
LNCipedia gene ID: lnc-ANKRD30B-2
Ensembl Gene ID: ENSG00000263618
Ensembl Transcript ID: ENST00000584414
Location (hg38): chr18:14905443-14915628
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584414.1; RP11-527H14.4-001; OTTHUMT00000443401.1; NONHSAT058539
Alternative gene names: ENSG00000263618.1; RP11-527H14.4; OTTHUMG00000178810.1; ENSG00000263618.5; AP005121.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.1781 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD30B-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-2:2
4.0 lnc-ANKRD30B-2:2
4.1 lnc-ANKRD30B-2:2
5.0 lnc-ANKRD30B-2:2
5.1 lnc-RIOK3-91:3
5.2 lnc-ANKRD30B-2:2