Transcript: lnc-ANKRD27-2:12

Basic information

LNCipedia transcript ID: lnc-ANKRD27-2:12 
LNCipedia gene ID: lnc-ANKRD27-2
Location (hg38): chr19:32389839-32405999
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1622 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267213.3|MICT00000172931.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -162.6428 non-coding 
CPAT coding probability 2.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD27-2:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD27-2:12
5.0 lnc-ANKRD27-2:12
5.1 lnc-SCGB2B2-96:2
5.2 lnc-ANKRD27-2:12