Transcript: lnc-ANKRD20A2-12:6

Basic information

LNCipedia transcript ID: lnc-ANKRD20A2-12:6 
LNCipedia gene ID: lnc-ANKRD20A2-12
Location (hg38): chr9:40500654-40566583
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 508 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000618223.4
Alternative gene names: ENSG00000184906.9; AC129778.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 139.7429 coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A2-12:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANKRD20A3-12:7
4.1 lnc-ANKRD20A3-12:7
5.0 lnc-ANKRD20A3-12:7
5.1 lnc-DCAF10-40:5
5.2 lnc-ANKRD20A2-12:6