Transcript: lnc-ANKRD20A1-23:1

Basic information

LNCipedia transcript ID: lnc-ANKRD20A1-23:1 
LNCipedia gene ID: lnc-ANKRD20A1-23
Location (hg38): chr9:67725252-67725688
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 315 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT131425; FPKM1_group_33062_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.726 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD20A1-23:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27E1.1-23:1
4.0 lnc-FAM27E1.1-23:1
4.1 lnc-FAM27E1.1-23:1
5.0 lnc-FAM27E1.1-23:1
5.1 lnc-ZNF658-23:1
5.2 lnc-ANKRD20A1-23:1