Transcript: lnc-ANKRD18B-3:4

Basic information

LNCipedia transcript ID: lnc-ANKRD18B-3:4 
LNCipedia gene ID: lnc-ANKRD18B-3
Location (hg38): chr9:33474140-33492273
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2738 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105250.1|MICT00000357325.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3238 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD18B-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD18B-3:4
5.0 lnc-ANKRD18B-3:4
5.1 lnc-RECK-63:2
5.2 lnc-ANKRD18B-3:4