Transcript: lnc-ANAPC1-5:2

Basic information

LNCipedia transcript ID: lnc-ANAPC1-5:2 
LNCipedia gene ID: lnc-ANAPC1-5
Ensembl Gene ID: ENSG00000270190
Ensembl Transcript ID: ENST00000603052
Location (hg38): chr2:111266868-111267473
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 606 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000603052.1
Alternative gene names: ENSG00000270190.1; RP11-803D5.4; AC068491.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.5618 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANAPC1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC108463.1-4:2
4.0 lnc-AC108463.1-4:2
4.1 lnc-AC108463.1-4:2
5.0 lnc-AC108463.1-4:2
5.1 lnc-EN1-74:2
5.2 lnc-ANAPC1-5:2