Transcript: lnc-ALG12-5:3

Basic information

LNCipedia transcript ID: lnc-ALG12-5:3 
LNCipedia gene ID: lnc-ALG12-5
Location (hg38): chr22:49777890-49780310
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2421 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT087418; NR_026993
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.0809 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG12-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf34-5:1
4.0 lnc-C22orf34-5:1
4.1 lnc-C22orf34-5:1
5.0 lnc-C22orf34-5:1
5.1 lnc-HDAC10-9:1
5.2 lnc-ALG12-5:3