Transcript: lnc-ALDH1L2-1:4

Basic information

LNCipedia transcript ID: lnc-ALDH1L2-1:4 
LNCipedia gene ID: lnc-ALDH1L2-1
RefSeq ID: NR_121211
Location (hg38): chr12:105102472-105107642
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1104 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121211; NR_121211.1
Alternative gene names: LOC414300


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.8377 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1L2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALDH1L2-1:4
4.0 lnc-ALDH1L2-1:4
4.1 lnc-ALDH1L2-1:4
5.0 lnc-ALDH1L2-1:4
5.1 lnc-APPL2-1:5
5.2 lnc-ALDH1L2-1:4