Transcript: lnc-ALDH1B1-13:10

Basic information

LNCipedia transcript ID: lnc-ALDH1B1-13:10 
LNCipedia gene ID: lnc-ALDH1B1-13
Ensembl Gene ID: ENSG00000284612
Ensembl Transcript ID: ENST00000642095
Location (hg38): chr9:38650257-38662717
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4149 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642095.1
Alternative gene names: ENSG00000284612.1; AL591543.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.5993 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1B1-13:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DCAF10-13:10
5.1 lnc-DCAF10-13:10
5.2 lnc-ALDH1B1-13:10