Transcript: lnc-ALDH1A2-9:12

Basic information

LNCipedia transcript ID: lnc-ALDH1A2-9:12 
LNCipedia gene ID: lnc-ALDH1A2-9
Location (hg38): chr15:57992783-58038582
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 545 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT044086
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.0881 coding 
CPAT coding probability 4.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALDH1A2-9:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM10-9:12
4.0 lnc-ALDH1A2-9:12
4.1 lnc-ALDH1A2-9:12
5.0 lnc-ALDH1A2-9:12
5.1 lnc-ICE2-62:12
5.2 lnc-ALDH1A2-9:12