Transcript: lnc-AKTIP-1:6

Basic information

LNCipedia transcript ID: lnc-AKTIP-1:6 
LNCipedia gene ID: lnc-AKTIP-1
Location (hg38): chr16:53491839-53492931
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 923 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT142585
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 399.0845 coding 
CPAT coding probability 8.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AKTIP-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPGRIP1L-1:2
4.0 lnc-RPGRIP1L-1:2
4.1 lnc-RPGRIP1L-1:2
5.0 lnc-RPGRIP1L-1:2
5.1 lnc-CFAP20-99:2
5.2 lnc-AKTIP-1:6