Transcript: lnc-AKR1E2-5:4

Basic information

LNCipedia transcript ID: lnc-AKR1E2-5:4 
LNCipedia gene ID: lnc-AKR1E2-5
Location (hg38): chr10:4024938-4051756
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018671; NONHSAT011075
Alternative gene names: XLOC_008358; linc-AKR1E2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.5687 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1E2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1E2-5:4
3.1 lnc-AKR1E2-5:4
4.0 lnc-AKR1E2-5:4
4.1 lnc-AKR1E2-5:4
5.0 lnc-AKR1E2-5:4
5.1 lnc-NPY4R2-500:4
5.2 lnc-AKR1E2-5:4