Transcript: lnc-AKR1D1-1:3

Basic information

LNCipedia transcript ID: lnc-AKR1D1-1:3 
LNCipedia gene ID: lnc-AKR1D1-1
Location (hg38): chr7:138161782-138167636
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3647 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000094169.1|MICT00000334158.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.6006 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1D1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1D1-1:3
5.0 lnc-AKR1D1-1:3
5.1 lnc-CLEC2L-28:1
5.2 lnc-AKR1D1-1:3