Transcript: lnc-AIFM2-1:3

Basic information

LNCipedia transcript ID: lnc-AIFM2-1:3 
LNCipedia gene ID: lnc-AIFM2-1
Location (hg38): chr10:70001383-70007614
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 270 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018945; NONHSAT013822
Alternative gene names: XLOC_008844; linc-NEUROG3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8339 non-coding 
CPAT coding probability 2.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AIFM2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AIFM2-1:3
3.1 lnc-AIFM2-1:3
4.0 lnc-AIFM2-1:3
4.1 lnc-AIFM2-1:3
5.0 lnc-AIFM2-1:3
5.1 lnc-C10orf105-22:4
5.2 lnc-AIFM2-1:3