Transcript: lnc-AGT-6:1

Basic information

LNCipedia transcript ID: lnc-AGT-6:1 
LNCipedia gene ID: lnc-AGT-6
Location (hg38): chr1:230793887-230809326
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2423 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_213_chr1:230929632-230945072_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.471 non-coding 
CPAT coding probability 85.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AGT-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf198-3:4
4.0 lnc-AGT-6:1
4.1 lnc-AGT-6:1
5.0 lnc-AGT-6:1
5.1 lnc-EXOC8-13:1
5.2 lnc-AGT-6:1