Transcript: lnc-AGRP-1:28

Basic information

LNCipedia transcript ID: lnc-AGRP-1:28 
LNCipedia gene ID: lnc-AGRP-1
Location (hg38): chr16:67517951-67528705
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 730 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259804.1|ENCT00000167591.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.5085 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGRP-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGRP-1:28
5.0 lnc-AGRP-1:28
5.1 lnc-PSMB10-10:22
5.2 lnc-AGRP-1:28