Transcript: lnc-AFDN-2:1

Basic information

LNCipedia transcript ID: lnc-AFDN-2:1 
LNCipedia gene ID: lnc-AFDN-2
Location (hg38): chr6:167975948-167978370
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2339 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT116123
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 63.1385 coding 
CPAT coding probability 92.27% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AFDN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MLLT4-2:1
4.0 lnc-MLLT4-2:1
4.1 lnc-MLLT4-2:1
5.0 lnc-MLLT4-2:1
5.1 lnc-SYTL3-95:1
5.2 lnc-AFDN-2:1