Transcript: lnc-ADRA1D-4:3

Basic information

LNCipedia transcript ID: lnc-ADRA1D-4:3 
LNCipedia gene ID: lnc-ADRA1D-4
Location (hg38): chr20:4470065-4470371
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 307 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000054135.1|FTMT27800000247.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -604.2161 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADRA1D-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ADRA1D-4:3
5.0 lnc-ADRA1D-4:3
5.1 lnc-RNF24-4:4
5.2 lnc-ADRA1D-4:3