Transcript: lnc-ADIRF-1:2

Basic information

LNCipedia transcript ID: lnc-ADIRF-1:2 
LNCipedia gene ID: lnc-ADIRF-1
Ensembl Gene ID: ENSG00000271880
Ensembl Transcript ID: ENST00000433214
Location (hg38): chr10:86970741-87010126
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3078 bp
Exons: 12
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433214.2
Alternative gene names: ENSG00000271880.1; RP11-96C23.5; AGAP11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 383.5566 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADIRF-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf116-1:5
4.0 lnc-FAM25A-1:4
4.1 lnc-FAM25A-1:4
5.0 lnc-FAM25A-1:4
5.1 lnc-SMC3-324:3
5.2 lnc-ADIRF-1:2