Transcript: lnc-ADARB2-4:6

Basic information

LNCipedia transcript ID: lnc-ADARB2-4:6 
LNCipedia gene ID: lnc-ADARB2-4
Location (hg38): chr10:2169140-2176432
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00017897; ENST00000418524; ENST00000418524.1; RP11-69C17.4-001; OTTHUMT00000046436.1; NONHSAT010956
Alternative gene names: XLOC_008685; linc-ADARB2-2; ENSG00000231326; RP11-69C17.4; ENSG00000231326.1; OTTHUMG00000017546.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -673.821 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADARB2-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADARB2-3:1
3.1 lnc-ADARB2-3:1
4.0 lnc-ADARB2-4:6
4.1 lnc-ADARB2-4:6
5.0 lnc-ADARB2-4:6
5.1 lnc-KLF6-47:6
5.2 lnc-ADARB2-4:6