Transcript: lnc-ADAP1-1:1

Basic information

LNCipedia transcript ID: lnc-ADAP1-1:1 
LNCipedia gene ID: lnc-ADAP1-1
Ensembl Gene ID: ENSG00000273151
Ensembl Transcript ID: ENST00000609998
Location (hg38): chr7:879790-886547
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6758 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609998.1
Alternative gene names: ENSG00000273151.1; RP11-449P15.2; AC073957.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 64.8268 coding 
CPAT coding probability 54.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADAP1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAP1-1:1
4.0 lnc-ADAP1-1:1
4.1 lnc-ADAP1-1:1
5.0 lnc-ADAP1-1:1
5.1 lnc-PRKAR1B-4:1
5.2 lnc-ADAP1-1:1