Transcript: lnc-ADAMTS15-5:12

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-5:12 
LNCipedia gene ID: lnc-ADAMTS15-5
Location (hg38): chr11:130755436-130759024
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 676 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT025141; FPKM1_group_5602_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.5812 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-5:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf44-7:1
4.0 lnc-C11orf44-7:1
4.1 lnc-C11orf44-1:12
5.0 lnc-C11orf44-1:12
5.1 lnc-JAM3-26:12
5.2 lnc-ADAMTS15-5:12