Transcript: lnc-ACSM5-2:2

Basic information

LNCipedia transcript ID: lnc-ACSM5-2:2 
LNCipedia gene ID: lnc-ACSM5-2
Ensembl Gene ID: ENSG00000263253
Ensembl Transcript ID: ENST00000570859
Location (hg38): chr16:20208925-20209525
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 352 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570859.1; RP11-204E4.3-001; OTTHUMT00000438524.1; NONHSAT140917
Alternative gene names: ENSG00000263253.1; RP11-204E4.3; OTTHUMG00000177691.1; AC092132.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.8798 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACSM5-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSM5-2:2
4.0 lnc-ACSM5-2:2
4.1 lnc-ACSM5-2:2
5.0 lnc-ACSM5-2:2
5.1 lnc-TMC5-17:3
5.2 lnc-ACSM5-2:2