Transcript: lnc-ACRV1-2:1

Basic information

LNCipedia transcript ID: lnc-ACRV1-2:1 
LNCipedia gene ID: lnc-ACRV1-2
Location (hg38): chr11:125624573-125625877
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1305 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007343.1|FTMT24200007260.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.7069 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACRV1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-791J7.2.1-2:1
5.0 lnc-RP11-791J7.2.1-2:1
5.1 lnc-ADAMTS8-55:1
5.2 lnc-ACRV1-2:1