Transcript: lnc-ACP1-9:1

Basic information

LNCipedia transcript ID: lnc-ACP1-9:1 
LNCipedia gene ID: lnc-ACP1-9
Location (hg38): chr2:557825-564135
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1472 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003532; NONHSAT068564
Alternative gene names: XLOC_001308; linc-SNTG2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.3143 non-coding 
CPAT coding probability 64.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACP1-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACP1-8:1
3.1 lnc-ACP1-9:1
4.0 lnc-ACP1-9:1
4.1 lnc-ACP1-9:1
5.0 lnc-ACP1-9:1
5.1 lnc-SNX17-294:1
5.2 lnc-ACP1-9:1